*UPDATE*
I've received the procedure from Curtis and ran the characterization test. I was lucky to have the "OEM" handheld programmer because it was mandatory to perform the test.
Now my motor is a lot more responsive. The "slip gain" has now been set to 0.78 using the automated procedure and it looks it is a good setting because if I play with it by myself the response change quickly.
Now another question

...
Using my handheld programmer I can monitor the amp at the controller. The manual states: "
Current (RMS) of the controller, taking all three phases into account." I also use a Fluke 1000 DC amp-meter on my positive cable from the batteries.
Can someone explain to me why the reading is different ? The controller says ~200A and the Fluke says ~50A ?!
Which one should I trust to read my amps ??