Molten,
Thanks for all of the feedback. I absolutely agree with 1, 2, and 3. For the batteries I'm planning to use Gen 1 modules from a Leaf. That may change to Gen 2s depending on price when I go to buy. BMS if a definite (planning to use an Orion BMS since I'm rather ignorant on the topic). And I'm certain that the Hyper 9 would destroy the tranny and probably the final drive if I left the Tranny.
On the talk of the tranny, I'm still torn about using one or not. RPM wise, direct drive works out very well (~3400 rpm at 60 mph). Being an SRIPM motor, the Hyper 9 has near full torque at ~0 rpm all the way up to ~3600 rpm. Correct me if I'm wrong, but I believe that DC motors don't get full torque until ~100 rpm (can't remember where I read/heard that). If that's true, then I can see needing a tranny to get off the line with a DC motor (or pure inductance AC), but maybe not with the Hyper 9.
A 2 speed transmission seems like it would be ideal, but I'm not willing to pay $3-5k for a powerglide (or similar). I've kicked around the idea of building my own ~1.25:1 single speed transmission and pushing the motor RPMs up into the 6000 rpm range at highway speeds. If I go that route then I'll definitely have to do forced air or liquid cooling on the motor though, as it's continuous rating is only 3300 rpm.
It all really depends on what performance is going to be like and what I think I need (which I have no idea...). The car currently has the week 1500cc motor in (with problems), and I'm not very good on stick and it still seems to scoot about with plenty of pep (when the carb actually feeds fuel

).
On making a custom drive shaft or adapter plates. I have a full size mill and lathe as well as welders, grinders, etc. I think I can make just about anything I need, although I'll probably pay to have a proper drive shaft made. I'm really excited to get started. Just have to finish renovating the garage first! Almost done wiring, next up is insulation....
P.S. I didn't mean to put the angry face on the subject line...